Alterlab Biopython

AlterLab Creative Technologies Laboratory

Manipulate biological sequences, parse FASTA/GenBank/PDB files, run phylogenetics, and access NCBI/PubMed programmatically via Biopython (Bio.SeqIO, Bio.Entrez, Bio.PDB, Bio.Blast). Use when scripting custom bioinformatics pipelines, batch-processing sequence files, automating BLAST, or fetching records from Entrez — for quick one-off database lookups use gget, for unified multi-service…

Install

npx skills add AlterLab-IEU/AlterLab-Academic-Skills --skill alterlab-biopython

npx skills add AlterLab-IEU/AlterLab-Academic-Skills --skill alterlab-biopython -a claude-code -g

npx skills add AlterLab-IEU/AlterLab-Academic-Skills --skill alterlab-biopython -a codex -g

gemini skills install https://github.com/AlterLab-IEU/AlterLab-Academic-Skills.git --path skills/bioinformatics/alterlab-biopython

gh skill install AlterLab-IEU/AlterLab-Academic-Skills alterlab-biopython

git clone --depth 1 https://github.com/AlterLab-IEU/AlterLab-Academic-Skills /tmp/AlterLab-IEU__AlterLab-Academic-Skills
mkdir -p ~/.claude/skills ~/.agents/skills
cp -R /tmp/AlterLab-IEU__AlterLab-Academic-Skills/skills/bioinformatics/alterlab-biopython ~/.claude/skills/alterlab-biopython   # Claude Code
cp -R /tmp/AlterLab-IEU__AlterLab-Academic-Skills/skills/bioinformatics/alterlab-biopython ~/.agents/skills/alterlab-biopython   # Codex, Cursor, Gemini CLI, Copilot, OpenCode

Install

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