This skill should be used when working with annotated data matrices in Python, particularly for single-cell genomics analysis, managing experimental measurements with metadata, or handling large-scale biological datasets. Use when tasks involve AnnData objects, h5ad files, single-cell RNA-seq data, or integration with scanpy/scverse tools.
Install
npx skills add davila7/claude-code-templates --skill anndatanpx skills add davila7/claude-code-templates --skill anndata -a claude-code -gnpx skills add davila7/claude-code-templates --skill anndata -a codex -ggemini skills install https://github.com/davila7/claude-code-templates.git --path cli-tool/components/skills/scientific/anndatagh skill install davila7/claude-code-templates anndatagit clone --depth 1 https://github.com/davila7/claude-code-templates /tmp/davila7__claude-code-templates
mkdir -p ~/.claude/skills ~/.agents/skills
cp -R /tmp/davila7__claude-code-templates/cli-tool/components/skills/scientific/anndata ~/.claude/skills/anndata # Claude Code
cp -R /tmp/davila7__claude-code-templates/cli-tool/components/skills/scientific/anndata ~/.agents/skills/anndata # Codex, Cursor, Gemini CLI, Copilot, OpenCode