Run or plan tumor-normal, tumor-only, WGS, WES, or cancer-panel somatic variant workflows with pairing, contamination, panel-of-normals, purity, QC, and annotation checks.
Install
npx skills add openai/plugins --skill ngs-dna-somatic-variantsnpx skills add openai/plugins --skill ngs-dna-somatic-variants -a claude-code -gnpx skills add openai/plugins --skill ngs-dna-somatic-variants -a codex -ggemini skills install https://github.com/openai/plugins.git --path plugins/ngs-analysis/skills/ngs-dna-somatic-variantsgh skill install openai/plugins ngs-dna-somatic-variantsgit clone --depth 1 https://github.com/openai/plugins /tmp/openai__plugins
mkdir -p ~/.claude/skills ~/.agents/skills
cp -R /tmp/openai__plugins/plugins/ngs-analysis/skills/ngs-dna-somatic-variants ~/.claude/skills/ngs-dna-somatic-variants # Claude Code
cp -R /tmp/openai__plugins/plugins/ngs-analysis/skills/ngs-dna-somatic-variants ~/.agents/skills/ngs-dna-somatic-variants # Codex, Cursor, Gemini CLI, Copilot, OpenCode