Supports local computational pathology research with PathML: slide loading and tiling, preprocessing and QC, h5path storage, multiplex quantification, spatial graphs, and bounded model inference. Use for whole-slide H&E, CODEX, Vectra, Mesmer, HoVer-Net, and HACTNet workflows.
Install
npx skills add K-Dense-AI/scientific-agent-skills --skill pathmlnpx skills add K-Dense-AI/scientific-agent-skills --skill pathml -a claude-code -gnpx skills add K-Dense-AI/scientific-agent-skills --skill pathml -a codex -ggemini skills install https://github.com/K-Dense-AI/scientific-agent-skills.git --path skills/pathmlgh skill install K-Dense-AI/scientific-agent-skills pathmlgit clone --depth 1 https://github.com/K-Dense-AI/scientific-agent-skills /tmp/K-Dense-AI__scientific-agent-skills
mkdir -p ~/.claude/skills ~/.agents/skills
cp -R /tmp/K-Dense-AI__scientific-agent-skills/skills/pathml ~/.claude/skills/pathml # Claude Code
cp -R /tmp/K-Dense-AI__scientific-agent-skills/skills/pathml ~/.agents/skills/pathml # Codex, Cursor, Gemini CLI, Copilot, OpenCode