This skill performs protein-mediated regulatory community analysis from ChIA-PET datasets and provide a way for visualizing the communities. Use this skill when you have a annotated peak file (in BED format) from ChIA-PET experiment and you want to identify the protein-mediated regulatory community according to the BED and BEDPE file from ChIA-PET.
Install
npx skills add BIsnake2001/ChromSkills --skill regulatory-community-analysis-ChIA-PETnpx skills add BIsnake2001/ChromSkills --skill regulatory-community-analysis-ChIA-PET -a claude-code -gnpx skills add BIsnake2001/ChromSkills --skill regulatory-community-analysis-ChIA-PET -a codex -ggemini skills install https://github.com/BIsnake2001/ChromSkills.git --path 29.regulatory-community-ChIA-PETgh skill install BIsnake2001/ChromSkills regulatory-community-analysis-ChIA-PETgit clone --depth 1 https://github.com/BIsnake2001/ChromSkills /tmp/BIsnake2001__ChromSkills
mkdir -p ~/.claude/skills ~/.agents/skills
cp -R /tmp/BIsnake2001__ChromSkills/29.regulatory-community-ChIA-PET ~/.claude/skills/regulatory-community-analysis-ChIA-PET # Claude Code
cp -R /tmp/BIsnake2001__ChromSkills/29.regulatory-community-ChIA-PET ~/.agents/skills/regulatory-community-analysis-ChIA-PET # Codex, Cursor, Gemini CLI, Copilot, OpenCode