Single-cell RNA-seq and retained scverse workflow owner. Load .h5ad/10X data, manage AnnData metadata, plan scVI/scANVI batch-correction workflows, QC, normalization, PCA/UMAP/t-SNE, Leiden clustering, marker genes, cell type annotation, trajectory, for scRNA-seq analysis.
Install
npx skills add foryourhealth111-pixel/Vibe-Skills --skill scanpynpx skills add foryourhealth111-pixel/Vibe-Skills --skill scanpy -a claude-code -gnpx skills add foryourhealth111-pixel/Vibe-Skills --skill scanpy -a codex -ggemini skills install https://github.com/foryourhealth111-pixel/Vibe-Skills.git --path bundled/skills/scanpygh skill install foryourhealth111-pixel/Vibe-Skills scanpygit clone --depth 1 https://github.com/foryourhealth111-pixel/Vibe-Skills /tmp/foryourhealth111-pixel__Vibe-Skills
mkdir -p ~/.claude/skills ~/.agents/skills
cp -R /tmp/foryourhealth111-pixel__Vibe-Skills/bundled/skills/scanpy ~/.claude/skills/scanpy # Claude Code
cp -R /tmp/foryourhealth111-pixel__Vibe-Skills/bundled/skills/scanpy ~/.agents/skills/scanpy # Codex, Cursor, Gemini CLI, Copilot, OpenCode