Run nf-core bioinformatics pipelines (rnaseq, sarek, atacseq) on sequencing data. Use when analyzing RNA-seq, WGS/WES, or ATAC-seq data—either local FASTQs or public datasets from GEO/SRA. Triggers on nf-core, Nextflow, FASTQ analysis, variant calling, gene expression, differential expression, GEO reanalysis, GSE/GSM/SRR accessions, or samplesheet creation.
安装
npx skills add anthropics/knowledge-work-plugins --skill nextflow-developmentnpx skills add anthropics/knowledge-work-plugins --skill nextflow-development -a claude-code -gnpx skills add anthropics/knowledge-work-plugins --skill nextflow-development -a codex -ggemini skills install https://github.com/anthropics/knowledge-work-plugins.git --path bio-research/skills/nextflow-developmentgh skill install anthropics/knowledge-work-plugins nextflow-developmentgit clone --depth 1 https://github.com/anthropics/knowledge-work-plugins /tmp/anthropics__knowledge-work-plugins
mkdir -p ~/.claude/skills ~/.agents/skills
cp -R /tmp/anthropics__knowledge-work-plugins/bio-research/skills/nextflow-development ~/.claude/skills/nextflow-development # Claude Code
cp -R /tmp/anthropics__knowledge-work-plugins/bio-research/skills/nextflow-development ~/.agents/skills/nextflow-development # Codex, Cursor, Gemini CLI, Copilot, OpenCode