Analyzes Neuropixels extracellular recordings end-to-end with SpikeInterface. Covers loading SpikeGLX/Open Ephys/NWB data, preprocessing, drift/motion correction, Kilosort4 (and CPU) spike sorting, quality metrics, and unit curation (threshold-based, model-based UnitRefine, and AI-assisted visual review).
Install
npx skills add K-Dense-AI/scientific-agent-skills --skill neuropixels-analysisnpx skills add K-Dense-AI/scientific-agent-skills --skill neuropixels-analysis -a claude-code -gnpx skills add K-Dense-AI/scientific-agent-skills --skill neuropixels-analysis -a codex -ggemini skills install https://github.com/K-Dense-AI/scientific-agent-skills.git --path skills/neuropixels-analysisgh skill install K-Dense-AI/scientific-agent-skills neuropixels-analysisgit clone --depth 1 https://github.com/K-Dense-AI/scientific-agent-skills /tmp/K-Dense-AI__scientific-agent-skills
mkdir -p ~/.claude/skills ~/.agents/skills
cp -R /tmp/K-Dense-AI__scientific-agent-skills/skills/neuropixels-analysis ~/.claude/skills/neuropixels-analysis # Claude Code
cp -R /tmp/K-Dense-AI__scientific-agent-skills/skills/neuropixels-analysis ~/.agents/skills/neuropixels-analysis # Codex, Cursor, Gemini CLI, Copilot, OpenCode