Computational pathology toolkit for analyzing whole-slide images (WSI) and multiparametric imaging data. Use this skill when working with histopathology slides, H&E stained images, multiplex immunofluorescence (CODEX, Vectra), spatial proteomics, nucleus detection/segmentation, tissue graph construction, or training ML models on pathology data.
Install
npx skills add davila7/claude-code-templates --skill pathmlnpx skills add davila7/claude-code-templates --skill pathml -a claude-code -gnpx skills add davila7/claude-code-templates --skill pathml -a codex -ggemini skills install https://github.com/davila7/claude-code-templates.git --path cli-tool/components/skills/scientific/pathmlgh skill install davila7/claude-code-templates pathmlgit clone --depth 1 https://github.com/davila7/claude-code-templates /tmp/davila7__claude-code-templates
mkdir -p ~/.claude/skills ~/.agents/skills
cp -R /tmp/davila7__claude-code-templates/cli-tool/components/skills/scientific/pathml ~/.claude/skills/pathml # Claude Code
cp -R /tmp/davila7__claude-code-templates/cli-tool/components/skills/scientific/pathml ~/.agents/skills/pathml # Codex, Cursor, Gemini CLI, Copilot, OpenCode